Cytomine_Python_Client-2.0.2-py3.5.egg

STEP 1: Have you installed this repository?

If not, run this installation script command:

curl -s https://packagecloud.io/install/repositories/cytomine-uliege/Cytomine-python-client/script.python.sh | bash
copy
curl -s https://packagecloud.io/install/repositories/cytomine-uliege/Cytomine-python-client/script.python.sh | bash

STEP 2: Install the package
sudo pip install cytomine-python-client==2.0.2

Python client to interact with Cytomine.

Full description:
  # Cytomine Python client
 > Cytomine-python-client is an open-source Cytomine client written in Python. This client is a Python wrapper around Cytomine REST API gateway.
 [![Build Status](https://travis-ci.com/Cytomine-ULiege/Cytomine-python-client.svg?branch=master)](https://travis-ci.com/Cytomine-ULiege/Cytomine-python-client)
 [![GitHub release](https://img.shields.io/github/release/Cytomine-ULiege/Cytomine-python-client.svg)](https://github.com/Cytomine-ULiege/Cytomine-python-client/releases)
 [![GitHub](https://img.shields.io/github/license/Cytomine-ULiege/Cytomine-python-client.svg)](https://github.com/Cytomine-ULiege/Cytomine-python-client/blob/master/LICENSE)
 ## Overview
 The main access point to Cytomine data is its REST API. This client is a Python package that can be imported in an application and allows to import/export data from Cytomine-Core and Cytomine-IMS using RESTful web services e.g. to generate annotation (spatial) statistics, create regions of interest (e.g. tumor masks), add metadata to images/annotations, apply algorithms on image tiles, ...
 See [documentation](http://doc.cytomine.be/display/ALGODOC/%5BDOC%5D+Data+access) for more details.
 ## Requirements
 * Python 2.7 | 3.5+
 ## Install
 **To install *official* release of Cytomine-python-client, see @cytomine. Follow this guide to install forked version by ULiege.**
 ### Manual installation
 To download and install manually the package, see [manual installation procedure](http://doc.cytomine.be/display/ALGODOC/How+to+install+the+Cytomine+Python+Client).
 ### Automatic installation
 To retrieve package using Maven or Gradle, see [package repository](https://packagecloud.io/cytomine-uliege/Cytomine-python-client).
 ## Usage
 See [detailed usage documentation](http://doc.cytomine.be/display/DEVDOC/Part+5%3A+Cytomine+Python+Client).
 ### Basic example
 Three parameters are required to connect:
 * `CYTOMINE_URL`: The full URL of Cytomine core (e.g. “http://demo.cytomine.be”).
 * `PUBLIC_KEY`: Your cytomine public key.
 * `PRIVATE_KEY`: Your cytomine private key.
 First, the connection object has to be initialized.
 TODO
 The next sample code should print “Hello {username}” where {username} is replaced by your Cytomine username and print the list of available projects.
 TODO
 ## References
 When using our software, we kindly ask you to cite our website url and related publications in all your work (publications, studies, oral presentations,...). In particular, we recommend to cite (Marée et al., Bioinformatics 2016) paper, and to use our logo when appropriate. See our license files for additional details.
 - URL: http://www.cytomine.org/
 - Logo: [Available here](https://cytomine.coop/sites/cytomine.coop/files/inline-images/logo-300-org.png)
 - Scientific paper: Raphaël Marée, Loïc Rollus, Benjamin Stévens, Renaud Hoyoux, Gilles Louppe, Rémy Vandaele, Jean-Michel Begon, Philipp Kainz, Pierre Geurts and Louis Wehenkel. Collaborative analysis of multi-gigapixel imaging data using Cytomine, Bioinformatics, DOI: [10.1093/bioinformatics/btw013](http://dx.doi.org/10.1093/bioinformatics/btw013), 2016.
 ## License
 Apache 2.0
 ----
 See examples in https://github.com/cytomine/Cytomine-python-client/tree/master/client/examples and https://github.com/cytomine/Cytomine-python-client/tree/master/utilities/examples
 The client is automatically installed with the Docker/Bootstrap procedure, however it is possible to install it independently
 on remote computers. See installation instructions here:
 http://doc.cytomine.be/pages/viewpage.action?pageId=12321357

Checksums

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SHA1 5fa41eaba3fc52a6e0c0b5b66a130bd3786783dc
SHA256 5c900e47c86a060f20f79766941fd69732821c64bf3cd1f05bf26616d9fa4497
SHA512 2349836d945a5217cdd0f93cb215f715bfd2703000d43b48c456e0e5f5640863eac5ff58481c3b4af7619024507ff7437b05ea72609b9ed265d3203df6a39d9c

Files

  • cytomine/models/imagegroup.py
  • cytomine/models/image.py
  • cytomine/models/collection.py
  • cytomine/models/annotation.py
  • cytomine/models/__pycache__/user.cpython-35.pyc
  • cytomine/models/__pycache__/storage.cpython-35.pyc
  • cytomine/models/__pycache__/software.cpython-35.pyc
  • cytomine/models/__pycache__/social.cpython-35.pyc
  • cytomine/models/__pycache__/property.cpython-35.pyc
  • cytomine/models/__pycache__/project.cpython-35.pyc
  • cytomine/models/__pycache__/ontology.cpython-35.pyc
  • cytomine/models/__pycache__/model.cpython-35.pyc
  • cytomine/models/__pycache__/imagegroup.cpython-35.pyc
  • cytomine/models/__pycache__/image.cpython-35.pyc
  • cytomine/models/__pycache__/collection.cpython-35.pyc
  • cytomine/models/__pycache__/annotation.cpython-35.pyc
  • cytomine/models/__pycache__/__init__.cpython-35.pyc
  • cytomine/models/__init__.py
  • cytomine/cytomine.py
  • cytomine/cytomine_job.py
  • cytomine/__pycache__/cytomine.cpython-35.pyc
  • cytomine/__pycache__/cytomine_job.cpython-35.pyc
  • cytomine/__pycache__/__init__.cpython-35.pyc
  • cytomine/__init__.py

Uploaded

about 6 years ago

Package Size

128 KB

Downloads

43

wget

wget --content-disposition "https://packagecloud.io/cytomine-uliege/Cytomine-python-client/packages/python/Cytomine_Python_Client-2.0.2-py3.5.egg/download?distro_version_id=166"

Homepage

http://www.cytomine.org

License

LICENSE